mRNA expression
Gene:
DSCR8 (official gene symbol)Other symbol:
DSCR8CT family:
CT25CT identifier:
CT25.1aAliases from NCBI:
C21orf65 , MMA-1 , MTAG2Gene expression pattern ? : Testis-selective
Validation by Ludwig Institute of Cancer Research of mRNA expression in normal tissues and cell lines (RT-PCR)
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The figures shown in this section represent a standardized analysis of all reported CT-antigens in the same set of mRNA preparations from
normal human tissues and a selection of human cancer cell lines. The analysis was done by RT-PCR using the primer pairs indicated for each gene.
A total of 1.0 �g of RNA was reverse-transcribed into cDNA using the Omniscript RT kit (Qiagen, Valencia, CA) using oligo (dT)18 primers
(Invitrogen, Carlsbad, CA). JumpStart REDTaq� ReadyMix-(Sigma Aldrich, St. Louis,MO) was used for amplification according to the manufacturer's
instructions. Samples were amplified with a precycling hold at 95oC for 3 min, followed by 35 specific cycles of denaturation at 95oC
for 15 seconds,annealing for 30 seconds (10 cycles at 60oC, 10 cycles at 58oC and 15 cycles at 56oC) and extension at 72oC for 30 seconds followed by a final
extension step at 72oC for 7 minutes. The RT-PCR products were run on 1.5% agarose gels and stained by ethidium bromide. |
Published data of mRNA expression in normal tissues
ShowTissue | Methodology | PMID |
---|---|---|
Testis | RT-PCR | 11920614 |
Testis | RT-PCR | 14738373 |
Lung | Nested RT-PCR | 12036297 |
Testis | Nested RT-PCR | 12036297 |
Prostate | Nested RT-PCR | 12036297 |
Brain | Nested RT-PCR | 12036297 |
Uterus | Nested RT-PCR | 12036297 |
Bone marrow | Nested RT-PCR | 12036297 |
Placenta | Nested RT-PCR | 12036297 |
Colon | Nested RT-PCR | 12036297 |
Fetal brain | Nested RT-PCR | 12036297 |
Thymus | Nested RT-PCR | 12036297 |
Kidney | Nested RT-PCR | 12036297 |
Spleen | Nested RT-PCR | 12036297 |
Muscle | Nested RT-PCR | 12036297 |
Trachea | Nested RT-PCR | 12036297 |
Adrenal gland | Nested RT-PCR | 12036297 |
Spinal cord | Nested RT-PCR | 12036297 |
Salivary gland | Nested RT-PCR | 12036297 |
Testis | qRT-PCR | 16288839 |
Prostate | qRT-PCR | 16288839 |
Placenta | qRT-PCR | 16288839 |
Published data of mRNA expression in neoplasias
Gynecological cancer Show
Tumor Subtype | Sample type | Frequency | Methodology | PMID |
---|---|---|---|---|
Uterine carcinoma |
16 /122 (13%) | RT-PCR | 17363524 |
Melanocytic lesion Show
Published data of mRNA expression in Cell Lines
ShowOrigin tissue | Cell Line ID | Frequency | Methodology | PMID |
---|---|---|---|---|
Colon carcinoma | Colo320 s174T |
RT-PCR | 15472897 | |
Gastrict carcinoma | Hs746T |
RT-PCR | 15472897 | |
Liver carcinoma | PLC/RPF/5 |
RT-PCR | 15472897 | |
Lung carcinoma | GLC1 GLCp01 GLC2 GLCa01 GLCa02 GLC8(1) |
RT-PCR | 15472897 | |
Melanoma | 1F6 M14 BLM MV1 |
RT-PCR | 15472897 | |
Placenta (trophoblast) | JEG-3 | RT-PCR | 16288839 | |
Testicular teratoma | NTera2D1 | RT-PCR | 16288839 |
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