Gene
Gene:
TSP50 (non-official gene symbol)
Other symbol:
TSP50
CT family:
CT20
CT identifier:
CT20
Gene Identification
TSP50 was identified by molecular methods, by searching for differentially methylated DNA fragments in breast cancer (Yuan et al., 1999 PMID: 10397268).
Gene structure and chromosomal localization
TSP50 was proximally located on 3p12–14 by human/rodent somatic cell hybrid mapping and radiation hybrid mapping (Yuan et al., 1999 PMID: 10397268).
Chromosome band: 3p14-p12
See this gene in the UCSC Genome Browser :
See this gene in the NCBI Map Viewer Genome Browser :
Exon-intron structure and splicing variants
Splicing variants documented by RefSeqs:

SNPs
Show
ACCESSION |
ALLELES |
HET |
SE_HET |
FXN_CLASS |
RESIDUE |
AA_POSITION |
VALIDATED |
rs7612286 |
C/T |
0.062435 |
0.165286 |
coding-synonymous |
T |
15 |
YES |
rs7612286 |
C/T |
0.062435 |
0.165286 |
reference |
T |
15 |
YES |
rs34788938 |
G/T |
0.244898 |
0.249948 |
reference |
Q |
74 |
YES |
rs34788938 |
G/T |
0.244898 |
0.249948 |
missense |
P |
74 |
YES |
rs35261087 |
A/G |
0.0253123 |
0.109615 |
reference |
I |
206 |
NO |
rs35261087 |
A/G |
0.0253123 |
0.109615 |
coding-synonymous |
I |
206 |
NO |
rs35759696 |
C/T |
0.0253123 |
0.109615 |
coding-synonymous |
E |
307 |
NO |
rs35759696 |
C/T |
0.0253123 |
0.109615 |
reference |
E |
307 |
NO |
rs35866901 |
C/T |
0.00812995 |
0.0632367 |
missense |
I |
97 |
YES |
rs35866901 |
C/T |
0.00812995 |
0.0632367 |
reference |
V |
97 |
YES |