Gene
Gene:
SPACA3 (official gene symbol)
Other symbol:
SPACA3
CT family:
CT54
CT identifier:
CT54
Aliases from NCBI:
1700025M08Rik , ALLP17 , LYC3 , LYZL3 , MGC119058 , SLLP1
Gene structure and chromosomal localization
Chromosome band: 17q11.2
See this gene in the UCSC Genome Browser :
See this gene in the NCBI Map Viewer Genome Browser :
Exon-intron structure and splicing variants
Splicing variants documented by RefSeqs:

SNPs
Show
ACCESSION |
ALLELES |
HET |
SE_HET |
FXN_CLASS |
RESIDUE |
AA_POSITION |
VALIDATED |
rs28956 |
A/G |
0.0883059 |
0.19067 |
coding-synonymous |
D |
210 |
YES |
rs28956 |
A/G |
0.0883059 |
0.19067 |
reference |
D |
210 |
YES |
rs28963 |
C/T |
0 |
0 |
reference |
H |
99 |
YES |
rs28963 |
C/T |
0 |
0 |
missense |
R |
99 |
YES |
rs12325917 |
C/T |
0 |
0 |
reference |
V |
1 |
YES |
rs12325917 |
C/T |
0 |
0 |
coding-synonymous |
V |
1 |
YES |
rs16967845 |
A/G |
0.0163254 |
0.0888605 |
missense |
Y |
79 |
YES |
rs16967845 |
A/G |
0.0163254 |
0.0888605 |
reference |
C |
79 |
YES |
rs16967849 |
C/T |
0.0139853 |
0.0824443 |
reference |
N |
156 |
NO |
rs16967849 |
C/T |
0.0139853 |
0.0824443 |
coding-synonymous |
N |
156 |
NO |
rs34727343 |
C/T |
0.027392 |
0.113779 |
missense |
E |
11 |
NO |
rs34727343 |
C/T |
0.027392 |
0.113779 |
reference |
G |
11 |
NO |
rs35014584 |
A/G |
0.0266618 |
0.112339 |
reference |
P |
187 |
NO |
rs35014584 |
A/G |
0.0266618 |
0.112339 |
missense |
L |
187 |
NO |
rs35420663 |
C/T |
0.0280504 |
0.115058 |
missense |
T |
127 |
YES |
rs35420663 |
C/T |
0.0280504 |
0.115058 |
reference |
A |
127 |
YES |