SAGE(short, 10 nt tags) Show
SAGE(long, 17 nt tags) Show
MPSS (short, 13 nt tags) Show
EST Show
Tissue | Methodology | PMID |
---|---|---|
Testis | RT-PCR | 19609239 |
Thymus | RT-PCR | 19609239 |
Testis | Northern blot | 16406728 |
Thymus | Northern blot | 16406728 |
Colon | Northern blot | 16406728 |
Placenta | Northern blot | 16406728 |
Small intestine | Northern blot | 16406728 |
Hematologic malignacies Show
Tumor Subtype | Sample type | Frequency | Methodology | PMID |
---|---|---|---|---|
Myeloma |
Newly diagnosed patient | 247/320 (77%) | Microarray | 21738656 |
Myeloma |
Relapse patient | 48/264 (18%) | Microarray |
Lung cancer Show
Tumor Subtype | Sample type | Frequency | Methodology | PMID |
---|---|---|---|---|
Adenocarcinoma |
15/16 (94%) | qRT-PCR | 19337377 |
Origin tissue | Cell Line ID | Frequency | Methodology | PMID |
---|---|---|---|---|
Breast carcinoma | HMC1 HMC2 MCF7 SkBR3 |
RT-PCR | 19609239 | |
Colorectal carcinoma | HCT116 HCT15 Colo205 SW480 KM12LM |
RT-PCR | 19609239 | |
Esophageal carcinoma | KE4 | RT-PCR | 19609239 | |
Gallbladder carcinoma | KMG-A | RT-PCR | 19609239 | |
Head & Neck (oral premalignant cell lines) | SVpgC2a DOK D19 D20 POE9n-hTERT POE9n OKT6 |
qRT-PCR | 19287496 | |
Head and neck squamous cell carcinoma | CA1 UK1 CaLH2 CaLH3 CaDec11 CaDec12 H357 5PT PE3/JA VB6 CaLH2-R BICR31 SCC4 SCC9 SCC15 SqCC/Y1 |
qRT-PCR | 19287496 | |
Lung carcinoma | LNY-1 A549 LHK2 1-87 LK79 Sq-1 Lc817 Lu65 |
RT-PCR | 19609239 | |
Pancreatic carcinoma | BxPC3 CFPAC Panc-1 Su8686 HIP Hs766-T |
RT-PCR | 19609239 |
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