mRNA expression
Gene:
SPA17 (official gene symbol)Other symbol:
SPA17CT family:
CT22CT identifier:
CT22Aliases from NCBI:
SP17 , SP17-1Gene expression pattern ? : Testis-selective
Validation by Ludwig Institute of Cancer Research of mRNA expression in normal tissues and cell lines (RT-PCR)
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The figures shown in this section represent a standardized analysis of all reported CT-antigens in the same set of mRNA preparations from
normal human tissues and a selection of human cancer cell lines. The analysis was done by RT-PCR using the primer pairs indicated for each gene.
A total of 1.0 �g of RNA was reverse-transcribed into cDNA using the Omniscript RT kit (Qiagen, Valencia, CA) using oligo (dT)18 primers
(Invitrogen, Carlsbad, CA). JumpStart REDTaq� ReadyMix-(Sigma Aldrich, St. Louis,MO) was used for amplification according to the manufacturer's
instructions. Samples were amplified with a precycling hold at 95oC for 3 min, followed by 35 specific cycles of denaturation at 95oC
for 15 seconds,annealing for 30 seconds (10 cycles at 60oC, 10 cycles at 58oC and 15 cycles at 56oC) and extension at 72oC for 30 seconds followed by a final
extension step at 72oC for 7 minutes. The RT-PCR products were run on 1.5% agarose gels and stained by ethidium bromide. |
Published data of mRNA expression in normal tissues
ShowTissue | Methodology | PMID |
---|---|---|
Testis | RT-PCR | 18237105 |
Placenta | RT-PCR | 18237105 |
Skeletal muscle | RT-PCR | 18237105 |
Bladder | RT-PCR | 18237105 |
Lung | RT-PCR | 18237105 |
Spleen | RT-PCR | 18237105 |
Heart | RT-PCR | 18237105 |
Brain | RT-PCR | 18237105 |
Thymus | RT-PCR | 18237105 |
Uterus | RT-PCR | 18237105 |
Stomach | RT-PCR | 18237105 |
Mammary gland | RT-PCR | 18237105 |
Pancreas | RT-PCR | 18237105 |
Prostate | RT-PCR | 18237105 |
Colon | RT-PCR | 18237105 |
Bone marrow | RT-PCR | 18237105 |
Synoviocytes (from rheumatoid arthritis patients) | RT-PCR | 12739786 |
Testis | Northern blot | 8688458 |
Testis | RT-PCR/Northern blot | 11222401 |
Testis | Northern blot | 12213290 |
Testis | RT-PCR | 16438728 |
Testis | RT-PCR | 12530914 |
Brain | RT-PCR | 12530914 |
Heart | RT-PCR | 12530914 |
Kidney | RT-PCR | 12530914 |
Liver | RT-PCR | 12530914 |
Lung | RT-PCR | 12530914 |
Pancreas | RT-PCR | 12530914 |
Placenta | RT-PCR | 12530914 |
Skeletal muscle | RT-PCR | 12530914 |
Testis | RT-PCR | 12213290 |
Adrenal gland | RT-PCR | 12213290 |
Skeletal muscle | RT-PCR | 12213290 |
Ovary | RT-PCR | 12213290 |
Spinal cord | RT-PCR | 12213290 |
Lymph node | RT-PCR | 12213290 |
Esophagus | RT-PCR | 12213290 |
Parathyroid gland | RT-PCR | 12213290 |
Published data of mRNA expression in neoplasias
Hematologic malignacies Show
Tumor Subtype | Sample type | Frequency | Methodology | PMID |
---|---|---|---|---|
Myeloma |
12/47 (26%) | RT-PCR | 11222401 |
Esophageal cancer Show
Tumor Subtype | Sample type | Frequency | Methodology | PMID |
---|---|---|---|---|
Squamous cell carcinoma |
26 of 30 (86%) | RT-PCR | 17230514 |
Ovarian cancer Show
Published data of mRNA expression in Cell Lines
ShowOrigin tissue | Cell Line ID | Frequency | Methodology | PMID |
---|---|---|---|---|
Cervical carcinoma | HeLa | RT-PCR | 12213290 | |
Lung carcinoma | A459 Calu1 |
RT-PCR | 12213290 | |
Lymphoma (Burkitt) | Daudi Raji |
RT-PCR | 11568003 | |
Lymphoma (T Cell Lymphoma) | Jurkat | RT-PCR | 11568003 | |
Melanoma | 4CS | RT-PCR | 12213290 | |
Myeloma | ARP-1 ARK MER |
RT-PCR | 11568003 | |
Osteosarcoma | 143TK | RT-PCR | 12213290 | |
plasma cell leukemia | ARH-77 | RT-PCR | 11568003 | |
Prostate carcinoma | LuCaP Du145 PC3 |
RT-PCR | 12213290 |
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