Gene
Gene:
SPO11 (official gene symbol)
Other symbol:
SPO11
CT family:
CT35
CT identifier:
CT35
Aliases from NCBI:
MGC39953
Gene Identification
SPO11 was identified by “in silico” methods - Database mining (Koslowski et al., 2002 PMID: 12438276).
Gene structure and chromosomal localization
Human SPO1 was localized to 20q13.2–q13.3, using fluorescence in situ hybridization (Romanienko & Camerini-Otero, 1999 PMID: 10534401).
Chromosome band: 20q13.2-q13.3
See this gene in the UCSC Genome Browser :
See this gene in the NCBI Map Viewer Genome Browser :
Exon-intron structure and splicing variants
Splicing variants documented by RefSeqs:

SNPs
Show
ACCESSION |
ALLELES |
HET |
SE_HET |
FXN_CLASS |
RESIDUE |
AA_POSITION |
VALIDATED |
rs3736832 |
A/G |
0.00980368 |
0.0693234 |
reference |
M |
90 |
YES |
rs3736832 |
A/G |
0.00980368 |
0.0693234 |
missense |
V |
90 |
YES |
rs3736832 |
A/G |
0.00980368 |
0.0693234 |
reference |
M |
52 |
YES |
rs3736832 |
A/G |
0.00980368 |
0.0693234 |
missense |
V |
52 |
YES |
rs16980893 |
G/T |
0.0762957 |
0.179797 |
coding-synonymous |
T |
147 |
YES |
rs16980893 |
G/T |
0.0762957 |
0.179797 |
reference |
T |
147 |
YES |
rs16980893 |
G/T |
0.0762957 |
0.179797 |
coding-synonymous |
T |
109 |
YES |
rs16980893 |
G/T |
0.0762957 |
0.179797 |
reference |
T |
109 |
YES |
rs17406460 |
C/T |
0.00364298 |
0.0425231 |
reference |
A |
201 |
YES |
rs17406460 |
C/T |
0.00364298 |
0.0425231 |
missense |
V |
201 |
YES |
rs17406460 |
C/T |
0.00364298 |
0.0425231 |
reference |
A |
163 |
YES |
rs17406460 |
C/T |
0.00364298 |
0.0425231 |
missense |
V |
163 |
YES |
rs28368062 |
A/G |
0.04299 |
0.140167 |
reference |
T |
35 |
YES |
rs28368062 |
A/G |
0.04299 |
0.140167 |
missense |
A |
35 |
YES |
rs28368082 |
C/T |
0.0104709 |
0.0715948 |
reference |
R |
210 |
NO |
rs28368082 |
C/T |
0.0104709 |
0.0715948 |
missense |
W |
210 |
NO |
rs28368082 |
C/T |
0.0104709 |
0.0715948 |
reference |
R |
172 |
NO |
rs28368082 |
C/T |
0.0104709 |
0.0715948 |
missense |
W |
172 |
NO |
rs35213336 |
C/G |
0.0266618 |
0.112339 |
reference |
T |
90 |
NO |
rs35213336 |
C/G |
0.0266618 |
0.112339 |
missense |
S |
90 |
NO |
rs35213336 |
C/G |
0.0266618 |
0.112339 |
reference |
T |
128 |
NO |
rs35213336 |
C/G |
0.0266618 |
0.112339 |
missense |
S |
128 |
NO |