Gene
Gene:
CTCFL (official gene symbol)
Other symbol:
CTCFL
CT family:
CT27
CT identifier:
CT27
Aliases from NCBI:
BORIS , CTCF-T , dJ579F20.2 , MGC163358
Gene structure and chromosomal localization
By combining data obtained by FISH with analyses of the Human Genome mapping data, BORIS was localized to the distal half of the chromosomal band 20q13.2 (Loukinov et al., 2002 PMID: 12011441).
Chromosome band: 20q13.31
See this gene in the UCSC Genome Browser :
See this gene in the NCBI Map Viewer Genome Browser :
Exon-intron structure and splicing variants
Splicing variants documented by RefSeqs:

SNPs
Show
ACCESSION |
ALLELES |
HET |
SE_HET |
FXN_CLASS |
RESIDUE |
AA_POSITION |
VALIDATED |
rs6025601 |
A/G |
0.434836 |
0.168332 |
coding-synonymous |
D |
380 |
YES |
rs6025601 |
A/G |
0.434836 |
0.168332 |
reference |
D |
380 |
YES |
rs6025606 |
C/T |
0.335169 |
0.235045 |
missense |
T |
176 |
YES |
rs6025606 |
C/T |
0.335169 |
0.235045 |
reference |
A |
176 |
YES |
rs6025606 |
C/T |
0.335169 |
0.235045 |
reference |
T |
176 |
YES |
rs6025606 |
C/T |
0.335169 |
0.235045 |
missense |
A |
176 |
YES |
rs6070122 |
C/G |
0.0282961 |
0.115531 |
reference |
Q |
524 |
YES |
rs6070122 |
C/G |
0.0282961 |
0.115531 |
missense |
E |
524 |
YES |
rs6070128 |
C/G |
0.409483 |
0.192523 |
missense |
Q |
49 |
YES |
rs6070128 |
C/G |
0.409483 |
0.192523 |
reference |
E |
49 |
YES |
rs6092491 |
C/T |
0.0195103 |
0.096822 |
missense |
H |
447 |
YES |
rs6092491 |
C/T |
0.0195103 |
0.096822 |
reference |
R |
447 |
YES |